Package AutoDockTools :: Package Utilities24 :: Module prepare_flexreceptor4

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Module prepare_flexreceptor4

source code

Functions

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usage()
Print helpful, accurate usage statement to stdout.

Variables

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receptor_filename = None

residues_to_move = None

verbose = None

disallow = ""

disallowed_pairs = ""

rigid_filename = None

flexres_filename = None

r = Read(receptor_filename) [0]

res_names = residues_to_move.split('_')

d = {}

all_res = ResidueSet(all_res)

all_bnds = BondSet()

bnd_pairs = disallowed_pairs.split(':')

fdp = AD4FlexibleReceptorPreparation(r, residues= all_res,...

Function Details

[hide private]

usage()

source code

Print helpful, accurate usage statement to stdout.

Variables Details

[hide private]

receptor_filename

None

Value:

None

residues_to_move

None

Value:

None

verbose

None

Value:

None

disallow

None

Value:

""

disallowed_pairs

None

Value:

""

rigid_filename

None

Value:

None

flexres_filename

None

Value:

None

r

None

Value:

Read(receptor_filename) [0]

res_names

None

Value:

residues_to_move.split('_')

d

None

Value:

{}

all_res

None

Value:

ResidueSet(all_res)

all_bnds

None

Value:

BondSet()

bnd_pairs

None

Value:

disallowed_pairs.split(':')

fdp

None

Value:

AD4FlexibleReceptorPreparation(r, residues= all_res, rigid_filename= r
igid_filename, flexres_filename= flexres_filename, non_rotatable_bonds
= all_bnds)