Module atomTypeTools

This module implements classes to support AutoDock atomtypes
    including:
        NonpolarHydrogenMerger: a class which detects and then
            merges nonpolarHydrogens with the heavy atoms to 
            which each is bound.
        LonepairMerger: a class which detects and then
            merges lonepairs with the heavy atoms to 
            which each is bound.
        AromaticCarbonManager: a class used for managing 
            names + autodock_element fields of
            aromatic carbons in cycles which it judges
            flat enough according to its 'cutoff' parameter
            to be considered aromatic.
        SolvationParameterizer: class used to assign solvation 
            parameters 'AtSolPar' and 'AtVol' to each atom in 
            receptor molecules for autodock305 experiment