Package AutoDockTools :: Module autogpfCommands :: Class SetBoxParameters

Class SetBoxParameters

ViewerFramework.VFCommand.Command --+    
                                    |    
              Pmv.mvCommand.MVCommand --+
                                        |
                                       SetBoxParameters

allows user to set center, spacing, and extent of grids (number of pts in each dimension) to be calculated

Instance Methods

[hide private]

__init__(self)

onAddCmdToViewer(self)
method called when an instance of this command is added to the viewer.

guiCallback(self)
called each time the menuText['SetGridMB'] button is pressed

updateValues(self)

buildForm(self)

buildMenu(self, keyList, mB, vars, cmd, type='radio', cmdList=None)

buildFileMenu(self, event=None)

buildCenterMenu(self, event=None)

buildVisiMenu(self, event=None)

buildHelpMenu(self, event=None)

Close_cb(self, event=None)

Accept_cb(self, event=None)

setCenVal(self, val, event=None)

pickCenter(self, event=None)

autoCenterLig(self, event=None)

findAutoLigandCenter(self)

adjustSideLengths(self, ligand)

autoCenter(self, event=None)

findAutoMacroCenter(self)

updateCenFromName(self, event=None)

setCenter(self, mol)

zeroOffsets(self)

set_xoffset(self, val)

set_yoffset(self, val)

set_zoffset(self, val)

updateCoords(self, event=None)

updateTotalPtsVar(self)

updateBoth(self, event=None)

updateBox(self, event=None)

setVisiVal(self, val, event=None)

adjustMarker(self, event=None)

showCenterCross(self, event=None)

updateGridBox(self, event=None)

showGridBox(self, event=None)

__call__(self, gridcenter=(0.,0.,0.), npts=(40,40,40), spacing=.375, **kw)
None <- commandName( *args, **kw)

doit(self, *args, **kw)
virtual method.

Inherited from Pmv.mvCommand.MVCommand: strArg

Inherited from Pmv.mvCommand.MVCommand (private): _strArg

Inherited from ViewerFramework.VFCommand.Command: __repr__, addCallbackAfter, addCallbackBefore, addUndoCall, afterDoit, beforeDoit, buildFormDescr, buildLogArgList, checkDependencies, cleanup, customizeGUI, doitWrapper, getArguments, getHelp, getLastUsedValues, getLogArgs, getValNamedArgs, log, logString, onAddNewCmd, onCmdRun, setLastUsedValues, setupUndoAfter, setupUndoBefore, showForm, tkCb, updateGeom, warningMsg

Class Variables