Package MolKit :: Package pdb2pqr :: Package src :: Module inputgen
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Module inputgen

source code

inputgen class

Create an APBS input file using psize data

Written by Todd Dolinsky based on original sed script by Nathan Baker

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PDB2PQR -- An automated pipeline for the setup, execution, and analysis of
Poisson-Boltzmann electrostatics calculations

Nathan A. Baker (baker@biochem.wustl.edu)
Todd Dolinsky (todd@ccb.wustl.edu)
Dept. of Biochemistry and Molecular Biophysics
Center for Computational Biology
Washington University in St. Louis

Jens Nielsen (Jens.Nielsen@ucd.ie)
University College Dublin

Additional contributing authors listed in documentation and supporting
package licenses.

Copyright (c) 2003-2007.  Washington University in St. Louis.  
All Rights Reserved.

This file is part of PDB2PQR.

PDB2PQR is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.

PDB2PQR is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
GNU General Public License for more details.

You should have received a copy of the GNU General Public License
along with PDB2PQR; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307  USA

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Classes [hide private]
  Elec
An object for the ELEC section of an APBS input file
  Input
The input class.

Functions [hide private]
  splitInput(filename)
...
  usage()
Display the usage information for this script
  main()

Function Details [hide private]

splitInput(filename)

source code 

Split the parallel input file into multiple async file names

Parameters
    filename:  The path to the original parallel input
               file (string)

usage()

source code 
Display the usage information for this script

main()

source code 
None