Package Pmv :: Module APBSCommands :: Class APBSCmdToWebService

Class APBSCmdToWebService

source code

This object takes an APBSParams instance the Pmv.APBSCommands.py

Instance Methods

__init__(self, params, mol_1, mol_2=None, _complex=None, Parallel_flag=False, npx=2, npy=1, npz=1, ofrac=0.1)
Constructor for class APBSCmdToWebService params is APBSPrams instance mol_1,mol_2 and complex are molecule instances Parallel_flag used to indicate parallel mode npx npy npz are number of processors in x-, y- and z-directions ofrac is the amount of overlap between processor meshes

run(self, portAddress)
Runs APBS through Web Services

Method Details

[hide private]

init(self, params, mol_1, mol_2=None, _complex=None, Parallel_flag=False, npx=2, npy=1, npz=1, ofrac=0.1)
(Constructor)

source code

Constructor for class APBSCmdToWebService params is APBSPrams instance mol_1,mol_2 and complex are molecule instances Parallel_flag used to indicate parallel mode npx npy npz are number of processors in x-, y- and z-directions ofrac is the amount of overlap between processor meshes

run(self, portAddress)

source code

Runs APBS through Web Services

Class APBSCmdToWebService

__init__(self, params, mol_1, mol_2=None, _complex=None, Parallel_flag=False, npx=2, npy=1, npz=1, ofrac=0.1) (Constructor)

run(self, portAddress)

init(self, params, mol_1, mol_2=None, _complex=None, Parallel_flag=False, npx=2, npy=1, npz=1, ofrac=0.1)
(Constructor)