Package Pmv :: Module NucleicBases

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Module NucleicBases

Classes

Pyrimidine_old
Used for drawing pyrimidines: Thymine Uracil Cytosine

Functions

make_purine(residue, height=0.4, scale=1.2)
Creates vertices and normals for purines: Adenine Guanine

make_pyrimidine(residue, height=0.4, scale=1.2)
Creates vertices and normals for pyrimidines:Thymine Uracil Cytosine

Add_Nucleic_Bases(g, properties=None)
Adds Nucleic Bases to g.

Variables

vi = Viewer()

b = NucleicBases.Pyrimidine_old('b')

Function Details

make_purine(residue, height=0.4, scale=1.2)

Creates vertices and normals for purines: Adenine Guanine

make_pyrimidine(residue, height=0.4, scale=1.2)

Creates vertices and normals for pyrimidines:Thymine Uracil Cytosine

Add_Nucleic_Bases(g, properties=None)

Adds Nucleic Bases to g. g is a geometry created in Pmv.secondaryStructureCommands properties is class that holds information about Nucleic Acids colors and size

Variables Details

vi

None

Value:

Viewer()

b

None

Value:

NucleicBases.Pyrimidine_old('b')