Package Pmv :: Module amberCommands :: Class ConstrainAtomsAmber94

Class ConstrainAtomsAmber94

ViewerFramework.VFCommand.Command --+    
                                    |    
                  mvCommand.MVCommand --+
                                        |
                                       ConstrainAtomsAmber94


    This class allows you to constrain atoms of an Amber94 instance
    
Package : Pmv
    
Module  : amberCommands
    
Class   : ConstrainAtomsAmber94
    
Command : constrainAtomsAmber94
    
Synopsis:

    NumConstr<---constrainAtoms_amber94(key, atsToConstrain, anchorPts)

    
Arguments:

    key --- identifier to be key for this Amber94 instance in Amber94Config dictionary

    atsToConstrain --- atomset for which 3D-constrain points are specified in

    anchorPts --- a list of 3-D points, one per atsToConstrain

    kw --- possible md options

Instance Methods

[hide private]

onAddCmdToViewer(self)
method called when an instance of this command is added to the viewer.

__call__(self, key, atsToConstrain, anchorPts, **kw)
NumConstr<-constrainAtoms_amber94(key, atsToConstrain, anchorPts)

doit(self, key, atsToConstrain, anchorPts, **kw)
virtual method.

Close_cb(self, ifd, event=None)

buildForm(self, tstr, mols)

update(self, event=None)

Unconstrain_cb(self, event=None)

updateLabels(self, numConstr)

Accept_cb(self, event=None)

setAnchors(self, event=None)

updateForm2(self, event=None)

buildForm2(self)

updateForm2Entries(self, event=None)

setCurrentAt(self, at, event=None)

updateGeoms(self, event=None)

Reset_cb(self, event=None)

Accept_cb2(self, event=None)

guiCallback(self)

Inherited from mvCommand.MVCommand: __init__, strArg

Inherited from mvCommand.MVCommand (private): _strArg

Inherited from ViewerFramework.VFCommand.Command: __repr__, addCallbackAfter, addCallbackBefore, addUndoCall, afterDoit, beforeDoit, buildFormDescr, buildLogArgList, checkDependencies, cleanup, customizeGUI, doitWrapper, getArguments, getHelp, getLastUsedValues, getLogArgs, getValNamedArgs, log, logString, onAddNewCmd, onCmdRun, setLastUsedValues, setupUndoAfter, setupUndoBefore, showForm, tkCb, updateGeom, warningMsg

Class Variables