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ViewerFramework.VFCommand.Command --+ | mvCommand.MVCommand --+ | GetHydrogenBondEnergies
This class allows user to get a list of energies of HydrogenBonds. For this calculation, the bond must have a hydrogen atom AND it must know its type. Energy calculation based on "Protein Flexibility and dynamics using constraint theory", J. Molecular Graphics and Modelling 19, 60-69, 2001. MF Thorpe, Ming Lei, AJ Rader, Donald J.Jacobs and Leslie A. Kuhn. Package : Pmv Module : hbondCommands Class : GetHydrogenBondEnergies Command : getHBondEnergies Synopsis: [energies] <- getHBondEnergies(nodes, **kw) Required Arguments: nodes --- TreeNodeSet holding the current selection
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| __init__(self, func=None) | ||
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onAddCmdToViewer(self) method called when an instance of this command is added to the viewer. |
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__call__(self,
nodes,
**kw) [energies] <- getHBondEnergies(nodes, **kw) |
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| getEnergy(self, b) | ||
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doit(self,
hats) virtual method. |
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Inherited from Inherited from Inherited from |
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Inherited from |
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[energies] <- getHBondEnergies(nodes, **kw) nodes --- TreeNodeSet holding the current selection
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