Package Pmv :: Module hbondCommands :: Class ShowHydrogenBonds

Class ShowHydrogenBonds

ViewerFramework.VFCommand.Command --+    
                                    |    
                  mvCommand.MVCommand --+
                                        |
                                       ShowHydrogenBonds

This class allows user to visualize pre-existing HydrogenBonds between 
atoms in viewer
   
Package : Pmv
   
Module  : hbondCommands
   
Class   : ShowHydrogenBonds
   
Command : showHBonds
   
Synopsis:

    None <- showHBonds(nodes, **kw)

Instance Methods

[hide private]

__init__(self, func=None)

onAddCmdToViewer(self)
method called when an instance of this command is added to the viewer.

__call__(self, nodes, **kw)
None <- showHBonds(nodes, **kw)

reset(self)

doit(self, ats)
virtual method.

showHBondLC(self, hats, event=None)

dismiss_cb(self, event=None, **kw)

showDistances(self, event=None)

showEnergies(self, hats)

buildEnergies(self, hats)

showAngles(self, hats, event=None)

buildAngles(self, hats)

setupDisplay(self)

showAllHBonds(self, hats, event=None)

selAllHBonds(self, hats, event=None)

guiCallback(self)

Inherited from mvCommand.MVCommand: strArg

Inherited from mvCommand.MVCommand (private): _strArg

Inherited from ViewerFramework.VFCommand.Command: __repr__, addCallbackAfter, addCallbackBefore, addUndoCall, afterDoit, beforeDoit, buildFormDescr, buildLogArgList, checkDependencies, cleanup, customizeGUI, doitWrapper, getArguments, getHelp, getLastUsedValues, getLogArgs, getValNamedArgs, log, logString, onAddNewCmd, onCmdRun, setLastUsedValues, setupUndoAfter, setupUndoBefore, showForm, tkCb, updateGeom, warningMsg

Class Variables

[hide private]

Inherited from ViewerFramework.VFCommand.Command: negateKw, objArgOnly

Method Details

Class ShowHydrogenBonds

__init__(self, func=None) (Constructor)

onAddCmdToViewer(self)

__call__(self, nodes, **kw) (Call operator)