Package Pmv :: Module pmvPalettes
[hide private]
[frames] | no frames]

Module pmvPalettes

source code

Variables [hide private]
  RasmolAmino = {'CYS': (0.89800000000000002, 0.89800000000000002, 0...
  RasmolAminoSortedKeys = ['ALA', 'GLY', 'PRO', 'LEU', 'ILE', 'VAL', 'MET', 'C...
  AtomElements = {'A': (0.0, 1.0, 0.0), 'C': (0.69999999999999996, 0....
  DavidGoodsell = {'ASNHD2': (0.69999999999999996, 0.69999999999999996...
  DavidGoodsellSortedKeys = ['C', 'HN', 'HH', 'H', 'O', 'SERHG', 'TYROH', 'TYRHH...
  SecondaryStructureSides = {'down': (0.0, 1.0, 0.0), 'right': (0.0, 0.0, 1.0), ...
  SecondaryStructureType = {'Turn': (0.375, 0.5, 1.0), 'Helix': (0.937000000000...
  Shapely = {'CYS': (0.996, 0.996, 0.0), 'ASP': (0.996, 0.117000...
  Rainbow = {'11': (0.5, 0.0, 1.0), '10': (1.0, 0.0, 0.5), '13':...
  RainbowSortedKey = ['0', '1', '2', '3', '4', '5', '6', '7', '8', '9', '...

Variables Details [hide private]

RasmolAmino

None
Value:
{'ALA': (0.78100000000000003, 0.78100000000000003, 0.78100000000000003
),
 'ARG': (0.078, 0.35199999999999998, 0.999),
 'ASN': (0.0, 0.89800000000000002, 0.89800000000000002),
 'ASP': (0.89800000000000002, 0.039, 0.039),
 'CYS': (0.89800000000000002, 0.89800000000000002, 0.0),
 'GLN': (0.0, 0.89800000000000002, 0.89800000000000002),
 'GLU': (0.89800000000000002, 0.039, 0.039),
...                                                                    
      

RasmolAminoSortedKeys

None
Value:
['ALA', 'GLY', 'PRO', 'LEU', 'ILE', 'VAL', 'MET', 'CYS', 'THR']        
      

AtomElements

None
Value:
{'A': (0.0, 1.0, 0.0),
 'C': (0.69999999999999996, 0.69999999999999996, 0.69999999999999996),
 'CA': (1.0, 0.0, 1.0),
 'H': (0.0, 1.0, 1.0),
 'N': (0.0, 0.0, 1.0),
 'O': (1.0, 0.0, 0.0),
 'P': (1.0, 0.0, 1.0),
 'S': (1.0, 1.0, 0.0)}                                                 
      

DavidGoodsell

None
Value:
{'ARGHE': (0.20000000000000001, 0.29999999999999999, 1.0),
 'ARGHH11': (0.20000000000000001, 0.29999999999999999, 1.0),
 'ARGHH12': (0.20000000000000001, 0.29999999999999999, 1.0),
 'ARGHH21': (0.20000000000000001, 0.29999999999999999, 1.0),
 'ARGHH22': (0.20000000000000001, 0.29999999999999999, 1.0),
 'ARGNE': (0.20000000000000001, 0.29999999999999999, 1.0),
 'ARGNH1': (0.20000000000000001, 0.29999999999999999, 1.0),
 'ARGNH2': (0.20000000000000001, 0.29999999999999999, 1.0),
...                                                                    
      

DavidGoodsellSortedKeys

None
Value:
['C', 'HN', 'HH', 'H', 'O', 'SERHG', 'TYROH', 'TYRHH', 'THRHG1']       
      

SecondaryStructureSides

None
Value:
{'down': (0.0, 1.0, 0.0),
 'left': (0.0, 0.0, 1.0),
 'right': (0.0, 0.0, 1.0),
 'up': (1.0, 0.0, 0.0)}                                                
      

SecondaryStructureType

None
Value:
{'Coil': (1.0, 1.0, 1.0),
 'Helix': (0.93700000000000006, 0.0, 0.5),
 'Strand': (1.0, 1.0, 0.0),
 'Turn': (0.375, 0.5, 1.0)}                                            
      

Shapely

None
Value:
{'ALA': (0.11700000000000001, 0.70299999999999996, 0.11700000000000001
),
 'ARG': (0.222, 0.222, 0.40600000000000003),
 'ASN': (0.73399999999999999, 0.55800000000000005, 0.55800000000000005
),
 'ASP': (0.996, 0.11700000000000001, 0.11700000000000001),
 'CYS': (0.996, 0.996, 0.0),
 'GLN': (0.996, 0.55800000000000005, 0.55800000000000005),
...                                                                    
      

Rainbow

None
Value:
{'0': (0.0, 0.0, 1.0),
 '1': (0.0, 1.0, 0.0),
 '10': (1.0, 0.0, 0.5),
 '11': (0.5, 0.0, 1.0),
 '12': (0.5, 0.0, 0.20000000000000001),
 '13': (0.0, 0.5, 0.20000000000000001),
 '14': (0.75, 0, 1),
 '15': (1.0, 0.75, 0),
...                                                                    
      

RainbowSortedKey

None
Value:
['0', '1', '2', '3', '4', '5', '6', '7', '8']