Everything
All Classes
Pmv.APBSCommands.APBSCmdToWebService
Pmv.APBSCommands.APBSDisplayOrthoSlice
Pmv.APBSCommands.APBSDisplay_Isocontours
Pmv.APBSCommands.APBSLoad_Profile
Pmv.APBSCommands.APBSMap_Potential_to_MSMS
Pmv.APBSCommands.APBSPreferences
Pmv.APBSCommands.APBSRun
Pmv.APBSCommands.APBSSave_Profile
Pmv.APBSCommands.APBSSetup
Pmv.APBSCommands.APBSVolumeRender
Pmv.APBSCommands.APBSWrite_APBS_Parameter_File
Pmv.APBSService_services.APBSBlockingPortTypeSoapBindingSOAP
Pmv.APBSService_services.APBSJobSubPortTypeSoapBindingSOAP
Pmv.APBSService_services.APBSServiceInterface
Pmv.APBSService_services.APBSServiceLocator
Pmv.APBSService_services.APBSStatusPortTypeSoapBindingSOAP
Pmv.APBSService_services.calculateBindingEnergyBlockingRequest
Pmv.APBSService_services.calculateBindingEnergyBlockingRequestWrapper
Pmv.APBSService_services.calculateBindingEnergyBlockingResponse
Pmv.APBSService_services.calculateBindingEnergyBlockingResponseWrapper
Pmv.APBSService_services.calculateBindingEnergyRequest
Pmv.APBSService_services.calculateBindingEnergyRequestWrapper
Pmv.APBSService_services.calculateBindingEnergyResponse
Pmv.APBSService_services.calculateBindingEnergyResponseWrapper
Pmv.APBSService_services.calculateElectrostaticPotentialBlockingRequest
Pmv.APBSService_services.calculateElectrostaticPotentialBlockingRequestWrapper
Pmv.APBSService_services.calculateElectrostaticPotentialBlockingResponse
Pmv.APBSService_services.calculateElectrostaticPotentialBlockingResponseWrapper
Pmv.APBSService_services.calculateElectrostaticPotentialRequest
Pmv.APBSService_services.calculateElectrostaticPotentialRequestWrapper
Pmv.APBSService_services.calculateElectrostaticPotentialResponse
Pmv.APBSService_services.calculateElectrostaticPotentialResponseWrapper
Pmv.APBSService_services.calculateSolvationEnergyBlockingRequest
Pmv.APBSService_services.calculateSolvationEnergyBlockingRequestWrapper
Pmv.APBSService_services.calculateSolvationEnergyBlockingResponse
Pmv.APBSService_services.calculateSolvationEnergyBlockingResponseWrapper
Pmv.APBSService_services.calculateSolvationEnergyRequest
Pmv.APBSService_services.calculateSolvationEnergyRequestWrapper
Pmv.APBSService_services.calculateSolvationEnergyResponse
Pmv.APBSService_services.calculateSolvationEnergyResponseWrapper
Pmv.APBSService_services.destroyRequest
Pmv.APBSService_services.destroyRequestWrapper
Pmv.APBSService_services.destroyResponse
Pmv.APBSService_services.destroyResponseWrapper
Pmv.APBSService_services.getOutputsRequest
Pmv.APBSService_services.getOutputsRequestWrapper
Pmv.APBSService_services.getOutputsResponse
Pmv.APBSService_services.getOutputsResponseWrapper
Pmv.APBSService_services.queryStatusRequest
Pmv.APBSService_services.queryStatusRequestWrapper
Pmv.APBSService_services.queryStatusResponse
Pmv.APBSService_services.queryStatusResponseWrapper
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.APBSOutputType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.BindingEnergyInputType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.BlockingOutputType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.BoundaryConditionsType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.CalculationParamsType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.ChargeDiscretizationType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.ElectrostaticPotentialInputType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.EnergyAndForceOutputType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.EquationTypeType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.FaultType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.FileFormatType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.FileOutputType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.GridCardinalityType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.GridParamsType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.GridType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.IonType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.JobIDType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.JobSubOutputType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.MoleculeFormatType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.MoleculeInType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.MoleculeOutType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.OutputFilesType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.ParallelParamsType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.ParameterType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.PhysicsParamsType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.SolvationEnergyInputType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.StatusOutputType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.SurfaceCoefficientsType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.apbsFaultOutput_Dec
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.calculateBindingEnergyBlockingInput_Dec
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.calculateBindingEnergyBlockingOutput_Dec
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.calculateBindingEnergyInput_Dec
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.calculateBindingEnergyOutput_Dec
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.calculateElectrostaticPotentialBlockingInput_Dec
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.calculateElectrostaticPotentialBlockingOutput_Dec
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.calculateElectrostaticPotentialInput_Dec
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.calculateElectrostaticPotentialOutput_Dec
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.calculateSolvationEnergyBlockingInput_Dec
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.calculateSolvationEnergyBlockingOutput_Dec
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.calculateSolvationEnergyInput_Dec
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.calculateSolvationEnergyOutput_Dec
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.destroyInput_Dec
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.getOutputsInput_Dec
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.getOutputsOutput_Dec
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.queryStatusInput_Dec
Pmv.APBSService_services_types.nbcr_sdsc_edu_apbs_types.queryStatusOutput_Dec
Pmv.APBSService_services_types.nbcr_sdsc_edu_molecule_types
Pmv.APBSService_services_types.nbcr_sdsc_edu_molecule_types.AtomType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_molecule_types.CoordinateType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_molecule_types.FieldNameType_Def
Pmv.APBSService_services_types.nbcr_sdsc_edu_molecule_types.MoleculeType_Def
Pmv.Grid.AutoGrid
Pmv.Grid.AutoGridSliceGui
Pmv.Grid.AutoGridSurfaceGui
Pmv.Grid.DX
Pmv.Grid.Grid
Pmv.Grid.GridPointSet
Pmv.Grid.Set
Pmv.Grid.equalObj
Pmv.Grid.greatObj
Pmv.Grid.lessObj
Pmv.Grid.notequalObj
Pmv.Grid.notgreatObj
Pmv.Grid.notlessObj
Pmv.Grid.tupleElement
Pmv.NucleicBases.Pyrimidine_old
Pmv.SLCommands.RestoreBsptCommand
Pmv.SLCommands.SLCommand
Pmv.SLCommands.SLGeom
Pmv.SLCommands.SaveBsptCommand
Pmv.SecuritymyproxyloginImplService_services.SecurityMyproxyloginServiceSoapBindingSOAP
Pmv.SecuritymyproxyloginImplService_services.SecuritymyproxyloginImplServiceInterface
Pmv.SecuritymyproxyloginImplService_services.SecuritymyproxyloginImplServiceLocator
Pmv.SecuritymyproxyloginImplService_services.loginUserMyProxyRequest
Pmv.SecuritymyproxyloginImplService_services.loginUserMyProxyRequestWrapper
Pmv.SecuritymyproxyloginImplService_services.loginUserMyProxyResponse
Pmv.SecuritymyproxyloginImplService_services.loginUserMyProxyResponseWrapper
Pmv.SecurityuserimportImplService_services.SecurityUserImportServiceSoapBindingSOAP
Pmv.SecurityuserimportImplService_services.SecurityuserimportImplServiceInterface
Pmv.SecurityuserimportImplService_services.SecurityuserimportImplServiceLocator
Pmv.SecurityuserimportImplService_services.listUsersRequest
Pmv.SecurityuserimportImplService_services.listUsersRequestWrapper
Pmv.SecurityuserimportImplService_services.listUsersResponse
Pmv.SecurityuserimportImplService_services.listUsersResponseWrapper
Pmv.VisionInterface.PmvNodes.GetMSMSGeom
Pmv.VisionInterface.PmvNodes.PmvChooseCommand
Pmv.VisionInterface.PmvNodes.PmvCommand
Pmv.VisionInterface.PmvNodes.PmvGetSelection
Pmv.VisionInterface.PmvNodes.PmvMolecule
Pmv.VisionInterface.PmvNodes.PmvMoleculeChooser
Pmv.VisionInterface.PmvNodes.PmvNode
Pmv.VisionInterface.PmvNodes.PmvRunCommand
Pmv.VisionInterface.PmvNodes.PmvSetCPKRadii
Pmv.VisionInterface.PmvNodes.PmvSetInstanceMatrices
Pmv.VisionInterface.PmvNodes.PmvSetNode
Pmv.VisionInterface.PmvNodes.PmvViewer
Pmv.VisionInterface.PmvNodes.PmvVolume
Pmv.VisionInterface.PmvTypes.PmvCmdType
Pmv.VisionInterface.PmvTypes.PmvType
Pmv.aboutCommands.About
Pmv.amberCommands.ConstrainAtomsAmber94
Pmv.amberCommands.FixAmberHAtomNamesCommand
Pmv.amberCommands.FixAmberHAtomNamesGUICommand
Pmv.amberCommands.FixAmberResNamesAndOrderAtomsCommand
Pmv.amberCommands.FreezeAtomsAmber94
Pmv.amberCommands.MinimizeAmber94
Pmv.amberCommands.MolecularDynamicsAmber94
Pmv.amberCommands.PlayMolecularDynamicsTrjAmber94
Pmv.amberCommands.SetMDOptsAmber94
Pmv.amberCommands.SetMinimOptsAmber94
Pmv.amberCommands.SetupAmber94
Pmv.bondsCommands.AddBondsCommand
Pmv.bondsCommands.AddBondsGUICommand
Pmv.bondsCommands.BuildBondsByDistance
Pmv.bondsCommands.RemoveBondsCommand
Pmv.bondsCommands.RemoveBondsGUICommand
Pmv.coarseMolSurfaceCommands.coarseMolSurface
Pmv.colorCommands.ColorByAtomType
Pmv.colorCommands.ColorByChain
Pmv.colorCommands.ColorByDG
Pmv.colorCommands.ColorByExpression
Pmv.colorCommands.ColorByInstance
Pmv.colorCommands.ColorByMolecule
Pmv.colorCommands.ColorByProperties
Pmv.colorCommands.ColorByResidueType
Pmv.colorCommands.ColorCommand
Pmv.colorCommands.ColorFromPalette
Pmv.colorCommands.ColorFromRamp
Pmv.colorCommands.ColorShapely
Pmv.colorMap.ColorMapGUI
Pmv.colorPalette.ColorPalette
Pmv.colorPalette.ColorPaletteFunction
Pmv.colorPaletteCommands.EditColorPaletteByAtomType
Pmv.controlPanelCommands.CPCommandEditor
Pmv.controlPanelCommands.ControlPanel
Pmv.controlPanelCommands.KeySelectable
Pmv.controlPanelCommands.NodeWithCheckbuttons
Pmv.controlPanelCommands.TreeViewWithCheckbuttons
Pmv.dashboard.LabelColumnDescriptor
Pmv.dashboard.MSMSColumnDescriptor
Pmv.dashboard.MVColumnDescriptor
Pmv.dashboard.MVDisplayColumnDescriptor
Pmv.dashboard.MVSelectColumnDescriptor
Pmv.dashboard.MVvisibilityColumnDescriptor
Pmv.dashboard.MolFragNodeWithButtons
Pmv.dashboard.MolFragTreeWithButtons
Pmv.dashboard.RibbonColumnDescriptor
Pmv.dashboardCommands.AddDashboardCmd
Pmv.dashboardCommands.Dashboard
Pmv.dashboardCommands.DashboardSuspendRedraw
Pmv.dashboardCommands.DockDashboard
Pmv.dashboardCommands.FloatDashboard
Pmv.dashboardCommands.ShowDashboard
Pmv.deleteCommands.DeleteAllMolecules
Pmv.deleteCommands.DeleteAtomSet
Pmv.deleteCommands.DeleteHydrogens
Pmv.deleteCommands.DeleteMolecule
Pmv.displayCommands.BindGeomToMolecularFragment
Pmv.displayCommands.BindGeomToMolecularFragmentBase
Pmv.displayCommands.DisplayBackboneTrace
Pmv.displayCommands.DisplayBoundGeom
Pmv.displayCommands.DisplayCPK
Pmv.displayCommands.DisplayCPKByProperty
Pmv.displayCommands.DisplayCommand
Pmv.displayCommands.DisplayInteractionsCommand
Pmv.displayCommands.DisplayLines
Pmv.displayCommands.DisplaySSSB
Pmv.displayCommands.DisplaySticksAndBalls
Pmv.displayCommands.ShowMolecules
Pmv.displayCommands.UndisplayBackboneTrace
Pmv.displayCommands.UndisplayBoundGeom
Pmv.displayCommands.UndisplayCPK
Pmv.displayCommands.UndisplayLines
Pmv.displayCommands.UndisplaySticksAndBalls
Pmv.editCommands.AddHydrogensCommand
Pmv.editCommands.AddHydrogensGUICommand
Pmv.editCommands.AddKollmanChargesCommand
Pmv.editCommands.AddKollmanChargesGUICommand
Pmv.editCommands.AssignAtomsRadiiCommand
Pmv.editCommands.AverageChargeErrorCommand
Pmv.editCommands.CheckChargesGUICommand
Pmv.editCommands.CheckResidueChargesCommand
Pmv.editCommands.ComputeGasteigerCommand
Pmv.editCommands.ComputeGasteigerGUICommand
Pmv.editCommands.EditAtomChargeGUICommand
Pmv.editCommands.EditAtomTypeCommand
Pmv.editCommands.EditAtomTypeGUICommand
Pmv.editCommands.FixHydrogenAtomNamesCommand
Pmv.editCommands.FixHydrogenAtomNamesGUICommand
Pmv.editCommands.MergeFieldsCommand
Pmv.editCommands.MergeLonePairsCommand
Pmv.editCommands.MergeLonePairsGUICommand
Pmv.editCommands.MergeNPHsCommand
Pmv.editCommands.MergeNPHsGUICommand
Pmv.editCommands.MergeSetsCommand
Pmv.editCommands.SetChargeCommand
Pmv.editCommands.SplitNodesCommand
Pmv.editCommands.SplitNodesGUICommand
Pmv.editCommands.TypeAtomsCommand
Pmv.editCommands.TypeBondsCommand
Pmv.extruder.ExtrudeObject
Pmv.extruder.ExtrudeSSElt
Pmv.extruder.Sheet2D
Pmv.extrusionCommands.ComputeSheet2DCommand
Pmv.extrusionCommands.DisplayPath3DCommand
Pmv.extrusionCommands.Nucleic_Acids_properties
Pmv.fileCommands.GROReader
Pmv.fileCommands.MMCIFReader
Pmv.fileCommands.MOL2Reader
Pmv.fileCommands.MoleculeLoader
Pmv.fileCommands.MoleculeReader
Pmv.fileCommands.PDBQReader
Pmv.fileCommands.PDBQSReader
Pmv.fileCommands.PDBQSWriter
Pmv.fileCommands.PDBQTReader
Pmv.fileCommands.PDBQTWriter
Pmv.fileCommands.PDBQWriter
Pmv.fileCommands.PDBReader
Pmv.fileCommands.PDBWriter
Pmv.fileCommands.PQRReader
Pmv.fileCommands.PQRWriter
Pmv.fileCommands.STLWriter
Pmv.fileCommands.SaveMMCIF
Pmv.fileCommands.VRML2Writer
Pmv.fileCommands.readFromWebCommand
Pmv.genparserCommands.DefinePdbSpecifications
Pmv.genparserCommands.GenPDBReader
Pmv.grid3DCommands.AddRemove
Pmv.grid3DCommands.Grid3DCommands
Pmv.grid3DCommands.GridMultiListbox
Pmv.grid3DCommands.IGraph
Pmv.grid3DCommands.IsocontourCommand
Pmv.grid3DCommands.LUT_data
Pmv.grid3DCommands.OrthoSliceCommand
Pmv.grid3DCommands.VolRenCommand
Pmv.grid3DCommands.myLUT
Pmv.grid3DCommands.myTF
Pmv.grid3DCommands.readAnyGrid
Pmv.gridCommands.AutoGridIsoSurface
Pmv.gridCommands.AutoGridReader
Pmv.gridCommands.DXReader
Pmv.gridCommands.DeleteAutoGrid
Pmv.gridCommands.GetOrthoSlice
Pmv.gridCommands.GridReader
Pmv.gridCommands.SetIsovalue
Pmv.guiTools.AugmentedMoleculeChooser
Pmv.guiTools.BarButton
Pmv.guiTools.CenterChooser
Pmv.guiTools.Kill
Pmv.guiTools.MoleculeChooser
Pmv.guiTools.MoleculeListChooser
Pmv.hbondCommands.AddHBondCommand
Pmv.hbondCommands.AddHBondCommandGUICommand
Pmv.hbondCommands.AddHBondHydrogens
Pmv.hbondCommands.AddHBondHydrogensGUICommand
Pmv.hbondCommands.BuildHydrogenBonds
Pmv.hbondCommands.BuildHydrogenBondsGUICommand
Pmv.hbondCommands.DisplayHBonds
Pmv.hbondCommands.DisplayHBondsAsCylinders
Pmv.hbondCommands.DisplayHBondsAsSpheres
Pmv.hbondCommands.ExtrudeHydrogenBonds
Pmv.hbondCommands.GetHydrogenBondAcceptors
Pmv.hbondCommands.GetHydrogenBondDonors
Pmv.hbondCommands.GetHydrogenBondEnergies
Pmv.hbondCommands.LimitHydrogenBonds
Pmv.hbondCommands.ReadIntermolHBonds
Pmv.hbondCommands.RemoveHBondCommand
Pmv.hbondCommands.RemoveHBondCommandGUICommand
Pmv.hbondCommands.ShowHBDonorsAcceptors
Pmv.hbondCommands.ShowHydrogenBonds
Pmv.hbondCommands.WriteAssemblyHBonds
Pmv.hbondCommands.WriteIntermolHBonds
Pmv.helpCommands.BugReportCommand
Pmv.helpCommands.mailingListsCommand
Pmv.interactiveCommands.MVBindCmdToKey
Pmv.interactiveCommands.MVIcomGUI
Pmv.interactiveCommands.MVSetInteractiveCmd
Pmv.labelCommands.LabelByExpression
Pmv.labelCommands.LabelByProperties
Pmv.measureCommands.MeasureAngle
Pmv.measureCommands.MeasureAngleGUICommand
Pmv.measureCommands.MeasureAtomCommand
Pmv.measureCommands.MeasureDistance
Pmv.measureCommands.MeasureDistanceCtrlGUICommand
Pmv.measureCommands.MeasureDistanceGUICommand
Pmv.measureCommands.MeasureGUICommand
Pmv.measureCommands.MeasureTorsion
Pmv.measureCommands.MeasureTorsionGUICommand
Pmv.moleculeViewer.MolGeomContainer
Pmv.moleculeViewer.MoleculeViewer
Pmv.msmsCommands.AssignBuriedAreas
Pmv.msmsCommands.ComputeMSMS
Pmv.msmsCommands.ComputeMSMSApprox
Pmv.msmsCommands.DisplayBuriedTriangles
Pmv.msmsCommands.DisplayIntermolecularBuriedTriangles
Pmv.msmsCommands.DisplayMSMS
Pmv.msmsCommands.IdentifyBuriedVertices
Pmv.msmsCommands.MsmsNPR
Pmv.msmsCommands.ReadMSMS
Pmv.msmsCommands.SaveMSMS
Pmv.msmsCommands.UndisplayMSMS
Pmv.msmsParser.MSMSParser
Pmv.multiresCommands.GoCoarserFiner
Pmv.multiresCommands.Multires
Pmv.multiresCommands.goCoarserFiner
Pmv.mvCommand.MVAtomICOM
Pmv.mvCommand.MVBondICOM
Pmv.mvCommand.MVCenterOnNodes
Pmv.mvCommand.MVCommand
Pmv.mvCommand.MVCommandGUI
Pmv.mvCommand.MVICOM
Pmv.mvCommand.MVInteractiveCmdCaller
Pmv.mvCommand.MVPrintNodeNames
Pmv.mvCommand.MVSetIcomLevel
Pmv.mvCommand.MVSetSelectionLevel
Pmv.pdb2pqrCommands.SetupPdb2Pqr
Pmv.picker.AtomPicker
Pmv.picker.BondPicker
Pmv.picker.MsmsPicker
Pmv.picker.NewMsmsPicker
Pmv.povrayCommands.Povray
Pmv.repairCommands.AddOXT
Pmv.repairCommands.AddOXTGUICommand
Pmv.repairCommands.CheckForCloseContacts
Pmv.repairCommands.CheckForCloseContactsGUICommand
Pmv.repairCommands.CheckForMissingAtoms
Pmv.repairCommands.CheckForMissingAtomsGUICommand
Pmv.repairCommands.EditHistHydrogens
Pmv.repairCommands.EditHistHydrogensGUICommand
Pmv.repairCommands.ModifyCTerminus
Pmv.repairCommands.ModifyNTerminus
Pmv.repairCommands.ModifyTermini
Pmv.repairCommands.RepairMissingAtoms
Pmv.repairCommands.RepairMissingAtomsGUICommand
Pmv.sdCommands.ApplyTransformations
Pmv.sdCommands.ColorMolIndexedPolygons
Pmv.sdCommands.DisplayMolIndexedPolygons
Pmv.sdCommands.MolIndexedPolygons
Pmv.sdCommands.ReadBlur
Pmv.sdCommands.ReadDockdata
Pmv.sdCommands.ReadHarmony
Pmv.sdCommands.ReadMSMS
Pmv.sdCommands.ReadMolIndexedPolygons
Pmv.sdCommands.ReadTransformations
Pmv.sdCommands.SelectVertex
Pmv.sdCommands.UndisplayMolIndexedPolygons
Pmv.secondaryStructureCommands.ColorBySSElementType
Pmv.secondaryStructureCommands.ComputeSecondaryStructureCommand
Pmv.secondaryStructureCommands.DisplayExtrudedSSCommand
Pmv.secondaryStructureCommands.ExtrudeSecondaryStructureCommand
Pmv.secondaryStructureCommands.RibbonCommand
Pmv.secondaryStructureCommands.UndisplayExtrudedSSCommand
Pmv.selectionCommands.MVAddSelectCommand
Pmv.selectionCommands.MVClearSelection
Pmv.selectionCommands.MVCreateSetIfNeeded
Pmv.selectionCommands.MVDeSelectCommand
Pmv.selectionCommands.MVDirectSelectCommand
Pmv.selectionCommands.MVInvertSelection
Pmv.selectionCommands.MVSaveSetCommand
Pmv.selectionCommands.MVSelectCommand
Pmv.selectionCommands.MVSelectFromStringCommand
Pmv.selectionCommands.MVSelectSetCommand
Pmv.selectionCommands.MVSelectSphericalRegion
Pmv.selectionCommands.MVXorSelectCommand
Pmv.setangleCommands.SetQuaternion
Pmv.setangleCommands.SetRelativeTorsion
Pmv.setangleCommands.SetTorsion
Pmv.setangleCommands.SetTorsionGUICommand
Pmv.setangleCommands.SetTranslation
Pmv.setangleCommands.TorsionAngle
Pmv.setangleCommands.TorsionHistory
Pmv.splineCommands.ComputeExtrudeSplineCommand
Pmv.splineCommands.ComputeSplineCommand
Pmv.splineCommands.ComputeSplineGUICommand
Pmv.splineCommands.CustomSplineCommand
Pmv.splineCommands.DisplayExtrudedSplineCommand
Pmv.splineCommands.DisplaySplineAsLineCommand
Pmv.splineCommands.ExtrudeSplineCommand
Pmv.splineCommands.UndisplayExtrudedSplineCommand
Pmv.splineCommands.UndisplaySplineAsLineCommand
Pmv.stringSelectorGUI.StringSelectorGUI
Pmv.superImposeCommands.PmvAlignmentEditor
Pmv.superImposeCommands.SuperImposeAtomsCommand
Pmv.superImposeCommands.SuperImposeAtomsGUICommand
Pmv.superImposeCommands.SuperimposeCoordsCommand
Pmv.superimposeCommandsNew.FreezeAtomsCommand
Pmv.superimposeCommandsNew.SuperimposeAtomsCommand
Pmv.superimposeCommandsNew.SuperimposeAtomsGUICommand
Pmv.superimposeCommandsNew.SuperimposeCommand
Pmv.superimposeCommandsNew.TransformAtomsCommand
Pmv.traceCommands.ComputeExtrudeTraceCommand
Pmv.traceCommands.ComputeTraceCommand
Pmv.traceCommands.CustomTraceCommand
Pmv.traceCommands.DisplayTraceCommand
Pmv.traceCommands.ExtrudeTraceCommand
Pmv.trajectoryCommands.OpenTrajectoryCommand
Pmv.trajectoryCommands.PlayTrajectoryCommand
Pmv.trajectoryCommands.TrajPlayer
Pmv.trajectoryCommands.TrajPlayerCached
Pmv.trajectoryCommands.TrajSliderWidget
Pmv.trajectoryCommands.Trajectory
Pmv.updateCommands.Update
Pmv.vectfieldCommands.loadVUFile
Pmv.vectfieldCommands.loadVect
Pmv.videoCommands.VideoCommand
Pmv.visionCommands.ExportSets
Pmv.visionCommands.VisionCommand
Pmv.writeMsmsAsCommands.WriteColoredM
Pmv.writeMsmsAsCommands.WriteSTL
float
int
All Functions
Pmv.APBSCommands.change_Menu_state
Pmv.APBSCommands.closestMatch
Pmv.APBSCommands.initModule
Pmv.Grid.ReadAutoGridMap
Pmv.Grid.extractOrderList
Pmv.Grid.findGroups
Pmv.Grid.findNeighbours
Pmv.Grid.findOneGroup
Pmv.Grid.selectNonZeroGrids
Pmv.Grid.tupleArrayElement
Pmv.Grid.tupleArrayList
Pmv.Grid.tupleArrayOrder
Pmv.Grid.tupleArrayOrderList
Pmv.Grid.uniqueSort
Pmv.NucleicBases.Add_Nucleic_Bases
Pmv.NucleicBases.make_purine
Pmv.NucleicBases.make_pyrimidine
Pmv.Ribbon.bspline
Pmv.Ribbon.cross
Pmv.Ribbon.interpPoints
Pmv.Ribbon.normalize
Pmv.Ribbon.ribbon2D
Pmv.Ribbon.ribdrw
Pmv.SLCommands.initModule
Pmv.SLCommands.triangle_normal
Pmv.VisionInterface.PmvNodes.importMolKitLib
Pmv.VisionInterface.PmvNodes.importSymLib
Pmv.VisionInterface.PmvNodes.importVizLib
Pmv.VisionInterface.PmvNodes.importVolLib
Pmv.aboutCommands.initModule
Pmv.amberCommands.initModule
Pmv.bondsCommands.initModule
Pmv.coarseMolSurfaceCommands.initModule
Pmv.colorCommands.initModule
Pmv.colorMap.cb
Pmv.colorPaletteCommands.initModule
Pmv.computeIsovalue.blurCoordsRadii
Pmv.computeIsovalue.computeBlurCurvature
Pmv.computeIsovalue.computeIsocontour
Pmv.computeIsovalue.computeIsovalue
Pmv.computeIsovalue.computeMSMSvolume
Pmv.computeIsovalue.decimate
Pmv.computeIsovalue.findIsoValueMol
Pmv.computeIsovalue.meshArea
Pmv.computeIsovalue.normalCorrection
Pmv.controlPanelCommands.initModule
Pmv.dashboard.loadAllColunms
Pmv.dashboard.moveTreeToWidget
Pmv.dashboardCommands.initModule
Pmv.deleteCommands.initModule
Pmv.displayCommands.initModule
Pmv.ed
Pmv.editCommands.check_edit_geoms
Pmv.editCommands.initModule
Pmv.extruder.ExtrudeNA
Pmv.extruder.getAverage
Pmv.extrusionCommands.initModule
Pmv.fileCommands.initModule
Pmv.genparserCommands.initModule
Pmv.grid3DCommands.get_icon
Pmv.grid3DCommands.initModule
Pmv.gridCommands.initModule
Pmv.hbondCommands.applyTransformation
Pmv.hbondCommands.check_hbond_geoms
Pmv.hbondCommands.dist
Pmv.hbondCommands.getAngle
Pmv.hbondCommands.getTransformedCoords
Pmv.hbondCommands.initModule
Pmv.helpCommands.initModule
Pmv.interactiveCommands.getICOMBar
Pmv.interactiveCommands.initModule
Pmv.labelCommands.initModule
Pmv.measureCommands.check_measure_geoms
Pmv.measureCommands.initModule
Pmv.moleculeViewer.Find_pmvrc
Pmv.msmsCommands.initModule
Pmv.msmsParser.testMSMSParser
Pmv.multiresCommands.initModule
Pmv.net
Pmv.nodes
Pmv.pdb2pqrCommands.initModule
Pmv.povrayCommands.initModule
Pmv.repairCommands.check_repair_geoms
Pmv.repairCommands.initModule
Pmv.sdCommands.initModule
Pmv.secondaryStructureCommands.initModule
Pmv.selectionCommands.initModule
Pmv.setangleCommands.initModule
Pmv.setangleCommands.torsionAngle
Pmv.setangleCommands.vvmult
Pmv.setcmode
Pmv.setdmode
Pmv.splineCommands.initModule
Pmv.startPMV
Pmv.superImposeCommands.initModule
Pmv.superimposeCommandsNew.initModule
Pmv.traceCommands.initModule
Pmv.trajectoryCommands.initModule
Pmv.updateCommands.initModule
Pmv.vectfieldCommands.initModule
Pmv.visionCommands.initModule
Pmv.writeMsmsAsCommands.initModule
All Variables
Pmv.APBSCommands.APBSDisplayOrthoSlice_GUI
Pmv.APBSCommands.APBSDisplay_Isocontours_GUI
Pmv.APBSCommands.APBSLoad_Profile_GUI
Pmv.APBSCommands.APBSMap_Potential_to_MSMS_GUI
Pmv.APBSCommands.APBSPreferences_GUI
Pmv.APBSCommands.APBSRun_GUI
Pmv.APBSCommands.APBSSave_Profile_GUI
Pmv.APBSCommands.APBSSetupGUI
Pmv.APBSCommands.APBSVolumeRender_GUI
Pmv.APBSCommands.APBSWrite_Parameter_File_GUI
Pmv.APBSCommands.APBS_proxy
Pmv.APBSCommands.APBS_ssl
Pmv.APBSCommands.APBSservicesFound
Pmv.APBSCommands.PROFILES
Pmv.APBSCommands.ResourceFolder
Pmv.APBSCommands.blinker
Pmv.APBSCommands.cascadeName
Pmv.APBSCommands.commandList
Pmv.APBSCommands.flag
Pmv.APBSCommands.state_GUI
Pmv.APBSCommands.test
Pmv.CRITICAL_DEPENDENCIES
Pmv.FlagCheck
Pmv.Grid.Complex0
Pmv.Grid.Complex16
Pmv.Grid.Complex32
Pmv.Grid.Complex64
Pmv.Grid.Complex8
Pmv.Grid.Float0
Pmv.Grid.Float16
Pmv.Grid.Float32
Pmv.Grid.Float64
Pmv.Grid.Float8
Pmv.Grid.Int0
Pmv.Grid.Int16
Pmv.Grid.Int32
Pmv.Grid.Int8
Pmv.Grid.absolute
Pmv.Grid.add
Pmv.Grid.arccos
Pmv.Grid.arccosh
Pmv.Grid.arcsin
Pmv.Grid.arcsinh
Pmv.Grid.arctan
Pmv.Grid.arctan2
Pmv.Grid.arctanh
Pmv.Grid.bitwise_and
Pmv.Grid.bitwise_or
Pmv.Grid.bitwise_xor
Pmv.Grid.ceil
Pmv.Grid.conjugate
Pmv.Grid.cos
Pmv.Grid.cosh
Pmv.Grid.divide
Pmv.Grid.divide_safe
Pmv.Grid.e
Pmv.Grid.equal
Pmv.Grid.exp
Pmv.Grid.fabs
Pmv.Grid.floor
Pmv.Grid.floor_divide
Pmv.Grid.fmod
Pmv.Grid.greater
Pmv.Grid.greater_equal
Pmv.Grid.hypot
Pmv.Grid.invert
Pmv.Grid.left_shift
Pmv.Grid.less
Pmv.Grid.less_equal
Pmv.Grid.log
Pmv.Grid.log10
Pmv.Grid.logical_and
Pmv.Grid.logical_not
Pmv.Grid.logical_or
Pmv.Grid.logical_xor
Pmv.Grid.maximum
Pmv.Grid.minimum
Pmv.Grid.multiply
Pmv.Grid.negative
Pmv.Grid.not_equal
Pmv.Grid.pi
Pmv.Grid.power
Pmv.Grid.remainder
Pmv.Grid.right_shift
Pmv.Grid.sin
Pmv.Grid.sinh
Pmv.Grid.sqrt
Pmv.Grid.subtract
Pmv.Grid.tan
Pmv.Grid.tanh
Pmv.Grid.true_divide
Pmv.NONCRITICAL_DEPENDENCIES
Pmv.NucleicBases.b
Pmv.NucleicBases.vi
Pmv.Ribbon.allatoms
Pmv.Ribbon.caat
Pmv.Ribbon.cao
Pmv.Ribbon.coords
Pmv.Ribbon.f
Pmv.Ribbon.mol
Pmv.Ribbon.n
Pmv.Ribbon.natoms
Pmv.Ribbon.nchords
Pmv.Ribbon.nres
Pmv.Ribbon.nrib
Pmv.Ribbon.offset
Pmv.Ribbon.p
Pmv.Ribbon.s
Pmv.Ribbon.v
Pmv.Ribbon.vi
Pmv.Ribbon.width
Pmv.SLCommands.BHTree_CUT
Pmv.SLCommands.OPS
Pmv.SLCommands.RestoreBsptGUI
Pmv.SLCommands.SLGUI
Pmv.SLCommands.SaveBsptGUI
Pmv.SLCommands.commandList
Pmv.SLCommands.initCommand
Pmv.SLCommands.sl
Pmv.VisionInterface.APBSIsoContour_net.GenSurf_2
Pmv.VisionInterface.APBSIsoContour_net.GenSurf_3
Pmv.VisionInterface.APBSIsoContour_net.Left_Isocontour_7
Pmv.VisionInterface.APBSIsoContour_net.Pmv_Grids_9
Pmv.VisionInterface.APBSIsoContour_net.Pmv_Viewer_6
Pmv.VisionInterface.APBSIsoContour_net.Right_Isocontour_8
Pmv.VisionInterface.APBSIsoContour_net.VolumeStats_1
Pmv.VisionInterface.APBSIsoContour_net.code
Pmv.VisionInterface.APBSIsoContour_net.state
Pmv.VisionInterface.APBSPot2MSMS_net.Choose_Molecule_3
Pmv.VisionInterface.APBSPot2MSMS_net.Color_Map_12
Pmv.VisionInterface.APBSPot2MSMS_net.Generic_22
Pmv.VisionInterface.APBSPot2MSMS_net.Get_MSMS_Geom_1
Pmv.VisionInterface.APBSPot2MSMS_net.Get_viewer_17
Pmv.VisionInterface.APBSPot2MSMS_net.Map_Pot_On_Geom_4
Pmv.VisionInterface.APBSPot2MSMS_net.Offset_9
Pmv.VisionInterface.APBSPot2MSMS_net.Pmv_0
Pmv.VisionInterface.APBSPot2MSMS_net.Pmv_Grids_24
Pmv.VisionInterface.APBSPot2MSMS_net.Pmv_Viewer_23
Pmv.VisionInterface.APBSPot2MSMS_net.Slice_Data_18
Pmv.VisionInterface.APBSPot2MSMS_net.call_method_13
Pmv.VisionInterface.APBSPot2MSMS_net.code
Pmv.VisionInterface.APBSPot2MSMS_net.input_Ports_5
Pmv.VisionInterface.CoarseMolSurface_net.Dial_6
Pmv.VisionInterface.CoarseMolSurface_net.Get_Selection_1
Pmv.VisionInterface.CoarseMolSurface_net.IndexedPolygons_4
Pmv.VisionInterface.CoarseMolSurface_net.Pmv_0
Pmv.VisionInterface.CoarseMolSurface_net.Pmv_Viewer_5
Pmv.VisionInterface.CoarseMolSurface_net.UT_Blur_2
Pmv.VisionInterface.CoarseMolSurface_net.UT_Isocontour_3
Pmv.VisionInterface.PmvNodes.msmsFound
Pmv.VisionInterface.PmvNodes.pmvlib
Pmv.aboutCommands.AboutGUI
Pmv.aboutCommands.commandList
Pmv.amberCommands.Amber94Config
Pmv.amberCommands.ConstrainAtomsAmber94CommandGUI
Pmv.amberCommands.CurrentAmber94
Pmv.amberCommands.FixAmberHAtomNamesGUICommandGUI
Pmv.amberCommands.FreezeAtomsAmber94CommandGUI
Pmv.amberCommands.MinimizeAmber94CommandGUI
Pmv.amberCommands.MolecularDynamicsAmber94CommandGUI
Pmv.amberCommands.PlayMolecularDynamicsTrjAmber94CommandGUI
Pmv.amberCommands.SetMDOptsAmber94CommandGUI
Pmv.amberCommands.SetMinimOptsAmber94CommandGUI
Pmv.amberCommands.SetupAmber94CommandGUI
Pmv.amberCommands.commandList
Pmv.amberCommands.fixAmberHAtomNamesGUICommandGuiDescr
Pmv.bondsCommands.AddBondsGUICommandGUI
Pmv.bondsCommands.BuildBondsByDistanceGUI
Pmv.bondsCommands.RemoveBondsGUICommandGUI
Pmv.bondsCommands.buildBondsByDistanceDescr
Pmv.bondsCommands.commandList
Pmv.bondsCommands.var
Pmv.cmdlib.cmdlist
Pmv.coarseMolSurfaceCommands.coarseMolSurfaceGUI
Pmv.coarseMolSurfaceCommands.commandList
Pmv.colorCommands.ColorByAtomTypeGUI
Pmv.colorCommands.ColorByChainGUI
Pmv.colorCommands.ColorByDGGUI
Pmv.colorCommands.ColorByExpressionGUI
Pmv.colorCommands.ColorByInstanceGUI
Pmv.colorCommands.ColorByMoleculeGUI
Pmv.colorCommands.ColorByPropertiesGUI
Pmv.colorCommands.ColorByResidueTypeGUI
Pmv.colorCommands.ColorGUI
Pmv.colorCommands.ColorShapelyGUI
Pmv.colorCommands.colorByAtomTypeGuiDescr
Pmv.colorCommands.colorByChainGuiDescr
Pmv.colorCommands.colorByDGGuiDescr
Pmv.colorCommands.colorByExpressionGuiDescr
Pmv.colorCommands.colorByInstanceGuiDescr
Pmv.colorCommands.colorByMoleculeGuiDescr
Pmv.colorCommands.colorByPropertiesGuiDescr
Pmv.colorCommands.colorByResdueTypeGuiDescr
Pmv.colorCommands.colorGuiDescr
Pmv.colorCommands.colorShapelyGuiDescr
Pmv.colorCommands.commandList
Pmv.colorMap.test
Pmv.colorPaletteCommands.EditColorPaletteByAtomTypeGUI
Pmv.colorPaletteCommands.commandList
Pmv.controlPanelCommands.ControlPanel_GUI
Pmv.controlPanelCommands.commandList
Pmv.dashboard.ColumnDescriptors
Pmv.dashboard.colAtColDescr
Pmv.dashboard.colChainColDescr
Pmv.dashboard.colDGColDescr
Pmv.dashboard.colInstColDescr
Pmv.dashboard.colMolColDescr
Pmv.dashboard.colResRASColDescr
Pmv.dashboard.colResSHAColDescr
Pmv.dashboard.colSSColDescr
Pmv.dashboard.displayCPKColDescr
Pmv.dashboard.displayLinesColDescr
Pmv.dashboard.displayMSMSColDescr
Pmv.dashboard.displaySSColDescr
Pmv.dashboard.displaySandBColDescr
Pmv.dashboard.labelColDescr
Pmv.dashboard.selectColDescr
Pmv.dashboard.visibilityColDescr
Pmv.dashboardCommands.Dashboard_GUI
Pmv.dashboardCommands.commandList
Pmv.deleteCommands.DeleteAllMoleculesGUI
Pmv.deleteCommands.DeleteAtomSetGUI
Pmv.deleteCommands.DeleteHydrogensGUI
Pmv.deleteCommands.DeleteMoleculeGUI
Pmv.deleteCommands.commandList
Pmv.deleteCommands.deleteAllMoleculesGuiDescr
Pmv.deleteCommands.deleteAtomSetGuiDescr
Pmv.deleteCommands.deleteHydrogensGuiDescr
Pmv.deleteCommands.deleteMoleculeGuiDescr
Pmv.displayCommands.BHTree_CUT
Pmv.displayCommands.BindGeomToMolecularFragmentGUI
Pmv.displayCommands.DisplayBackboneTraceGUI
Pmv.displayCommands.DisplayBoundGeomGUI
Pmv.displayCommands.DisplayCPKByPropertyGUI
Pmv.displayCommands.DisplayCPKGUI
Pmv.displayCommands.DisplayInteractionsCommandGUI
Pmv.displayCommands.DisplayLinesGUI
Pmv.displayCommands.DisplaySSSBGUI
Pmv.displayCommands.DisplaySticksAndBallsGUI
Pmv.displayCommands.ShowMoleculeGUI
Pmv.displayCommands.commandList
Pmv.displayCommands.displayBackboneTraceGuiDescr
Pmv.displayCommands.displayCPKByPropertyGuiDescr
Pmv.displayCommands.displayCPKGuiDescr
Pmv.displayCommands.displayInteractionsCommandGuiDescr
Pmv.displayCommands.displayLinesGuiDescr
Pmv.displayCommands.displaySSSBDescr
Pmv.displayCommands.displaySticksAndBallsGuiDescr
Pmv.displayCommands.showMoleculeGuiDescr
Pmv.editCommands.AddHydrogensGUICommandGUI
Pmv.editCommands.AddKollmanChargesGUICommandGUI
Pmv.editCommands.AssignAtomsRadiiCommandGUI
Pmv.editCommands.CheckChargesGUICommandGUI
Pmv.editCommands.ComputeGasteigerGUICommandGUI
Pmv.editCommands.EditAtomChargeGUICommandGUI
Pmv.editCommands.EditAtomTypeGUICommandGUI
Pmv.editCommands.FixHydrogenAtomNamesGUICommandGUI
Pmv.editCommands.MergeFieldsCommandGUI
Pmv.editCommands.MergeLonePairsGUICommandGUI
Pmv.editCommands.MergeNPHsGUICommandGUI
Pmv.editCommands.MergeSetsCommandGUI
Pmv.editCommands.SetChargeCommandGUI
Pmv.editCommands.SplitNodesGUICommandGUI
Pmv.editCommands.TypeAtomsCommandGUI
Pmv.editCommands.TypeBondsCommandGUI
Pmv.editCommands.addHydrogensGUICommandGuiDescr
Pmv.editCommands.addKollmanChargesGUICommandGuiDescr
Pmv.editCommands.assignAtomsRadiiGUICommandGuiDescr
Pmv.editCommands.checkChargesGUICommandGuiDescr
Pmv.editCommands.commandList
Pmv.editCommands.computeGasteigerGUICommandGuiDescr
Pmv.editCommands.editAtomChargeGUICommandGuiDescr
Pmv.editCommands.editAtomTypeGUICommandGuiDescr
Pmv.editCommands.fixHydrogenAtomNamesGUICommandGuiDescr
Pmv.editCommands.mergeFieldsCommandGuiDescr
Pmv.editCommands.mergeLonePairsCommandGuiDescr
Pmv.editCommands.mergeNPHsGUICommandGuiDescr
Pmv.editCommands.mergeSetsCommandGuiDescr
Pmv.editCommands.setChargeGUICommandGuiDescr
Pmv.editCommands.splitNodesGUICommandGuiDescr
Pmv.editCommands.typeAtomsCommandGuiDescr
Pmv.editCommands.typeBondsCommandGuiDescr
Pmv.extrusionCommands.ComputeSheet2DGUI
Pmv.extrusionCommands.DisplayPathGUI
Pmv.extrusionCommands.commandList
Pmv.fileCommands.MoleculeReaderGUI
Pmv.fileCommands.PDBQSWriterGUI
Pmv.fileCommands.PDBQTWriterGUI
Pmv.fileCommands.PDBQWriterGUI
Pmv.fileCommands.PDBWriterGUI
Pmv.fileCommands.PQRWriterGUI
Pmv.fileCommands.STLWriterGUI
Pmv.fileCommands.SaveMMCIFGUI
Pmv.fileCommands.VRML2WriterGUI
Pmv.fileCommands.commandList
Pmv.fileCommands.mol2ReaderGuiDescr
Pmv.fileCommands.pdbDescr
Pmv.fileCommands.pdbReaderGuiDescr
Pmv.fileCommands.pdbWriterDescr
Pmv.fileCommands.pdbqReaderGuiDescr
Pmv.fileCommands.pdbqWriterGuiDescr
Pmv.fileCommands.pdbqsReaderGuiDescr
Pmv.fileCommands.pdbqsWriterGuiDescr
Pmv.fileCommands.pdbqtReaderGuiDescr
Pmv.fileCommands.pdbqtWriterGuiDescr
Pmv.fileCommands.pqrReaderGuiDescr
Pmv.fileCommands.pqrWriterDescr
Pmv.fileCommands.readFromWebGUI
Pmv.fileCommands.stlWriterGuiDescr
Pmv.fileCommands.vrml2WriterGuiDescr
Pmv.genparserCommands.DefinePdbSpecificationsGUI
Pmv.genparserCommands.FieldNames
Pmv.genparserCommands.GenPDBReaderGUI
Pmv.genparserCommands.commandList
Pmv.genparserCommands.definePdbSpecificationsGuiDescr
Pmv.genparserCommands.genPDBReaderGuiDescr
Pmv.genparserCommands.specEntries
Pmv.genparserCommands.variableTypes
Pmv.grid3DCommands.AddRemoveGUI
Pmv.grid3DCommands.Grid3DGUI
Pmv.grid3DCommands.Grid_ICONPATH
Pmv.grid3DCommands.OrthoSliceGUI
Pmv.grid3DCommands.commandList
Pmv.grid3DCommands.displayIsocontourGUI
Pmv.grid3DCommands.globalFont
Pmv.grid3DCommands.height
Pmv.grid3DCommands.isocontour
Pmv.grid3DCommands.msg
Pmv.grid3DCommands.readAnyGridGUI
Pmv.grid3DCommands.rightClick
Pmv.grid3DCommands.typecodeDict
Pmv.grid3DCommands.width
Pmv.gridCommands.AutoGridIsoSurfaceGUI
Pmv.gridCommands.AutoGridReaderGUI
Pmv.gridCommands.DXReaderGUI
Pmv.gridCommands.DeleteAutoGridGUI
Pmv.gridCommands.GetOrthoSliceGUI
Pmv.gridCommands.GridReaderGUI
Pmv.gridCommands.autoGridIsoSurfaceguiDescr
Pmv.gridCommands.autoGridReaderGuiDescr
Pmv.gridCommands.commandList
Pmv.gridCommands.deleteAutoGridGUIDescr
Pmv.gridCommands.getOrthoSliceGuiDescr
Pmv.gridCommands.gridReaderGuiDescr
Pmv.guiTools.kill
Pmv.guiTools.user
Pmv.hbondCommands.AddHBondCommandGUICommandGUI
Pmv.hbondCommands.AddHBondGuiDescr
Pmv.hbondCommands.AddHBondHydrogensGUICommandGUI
Pmv.hbondCommands.AddHBondHydrogensGUICommandGuiDescr
Pmv.hbondCommands.BuildHydrogenBondsGUICommandGUI
Pmv.hbondCommands.BuildHydrogenBondsGUICommandGuiDescr
Pmv.hbondCommands.DisplayHBondsAsCylindersGUI
Pmv.hbondCommands.DisplayHBondsAsCylindersGuiDescr
Pmv.hbondCommands.DisplayHBondsAsSpheresGUI
Pmv.hbondCommands.DisplayHBondsAsSpheresGuiDescr
Pmv.hbondCommands.ExtrudeHydrogenBondsGUI
Pmv.hbondCommands.ExtrudeHydrogenBondsGuiDescr
Pmv.hbondCommands.LimitHydrogenBondsGUI
Pmv.hbondCommands.LimitHydrogenBondsGuiDescr
Pmv.hbondCommands.ReadIntermolHBondsGUI
Pmv.hbondCommands.ReadIntermolHBondsGuiDescr
Pmv.hbondCommands.RemoveHBondCommandGUICommandGUI
Pmv.hbondCommands.RemoveHBondGuiDescr
Pmv.hbondCommands.ShowHBDonorsAcceptorsGUI
Pmv.hbondCommands.ShowHBDonorsAcceptorsGuiDescr
Pmv.hbondCommands.ShowHydrogenBondsGUI
Pmv.hbondCommands.ShowHydrogenBondsGuiDescr
Pmv.hbondCommands.WriteAssemblyHBondsGUI
Pmv.hbondCommands.WriteAssemblyHBondsGuiDescr
Pmv.hbondCommands.WriteIntermolHBondsGUI
Pmv.hbondCommands.WriteIntermolHBondsGuiDescr
Pmv.hbondCommands.a_allAcceptors
Pmv.hbondCommands.allAcceptors
Pmv.hbondCommands.allDonors
Pmv.hbondCommands.commandList
Pmv.hbondCommands.n
Pmv.hbondCommands.sp2Acceptors
Pmv.hbondCommands.sp2Donors
Pmv.hbondCommands.sp3Acceptors
Pmv.hbondCommands.sp3Donors
Pmv.helpCommands.BugReportCommandGUI
Pmv.helpCommands.VarDict
Pmv.helpCommands.commandList
Pmv.helpCommands.mailingListsCommandGUI
Pmv.interactiveCommands.PCOMGUI
Pmv.interactiveCommands.commandList
Pmv.labelCommands.LabelByExpressionGUI
Pmv.labelCommands.LabelByPropertiesGUI
Pmv.labelCommands.commandList
Pmv.measureCommands.MeasureAngleGUICommandGUI
Pmv.measureCommands.MeasureDistanceGUICommandGUI
Pmv.measureCommands.MeasureTorsionGUICommandGUI
Pmv.measureCommands.commandList
Pmv.modlib.modlist
Pmv.moleculeViewer.ICONPATH
Pmv.moleculeViewer.mv
Pmv.msmsCommands.AssignBuriedAreasGUI
Pmv.msmsCommands.ComputeMSMSApproxGUI
Pmv.msmsCommands.ComputeMSMSGUI
Pmv.msmsCommands.DisplayBuriedTrianglesGUI
Pmv.msmsCommands.DisplayIntermolecularBuriedTrianglesGUI
Pmv.msmsCommands.DisplayMSMSGUI
Pmv.msmsCommands.IdentifyBuriedVerticesGUI
Pmv.msmsCommands.MsmsNPRGUI
Pmv.msmsCommands.ReadMSMSGUI
Pmv.msmsCommands.SaveMSMSGUI
Pmv.msmsCommands.assignBuriedSurfaceGuiDescr
Pmv.msmsCommands.commandList
Pmv.msmsCommands.displayBuriedIntermolecularTrianglesGuiDescr
Pmv.msmsCommands.displayBuriedTrianglesGuiDescr
Pmv.msmsCommands.identifyBuriedVerticesGuiDescr
Pmv.msmsCommands.msmsNPRGuiDescr
Pmv.multiresCommands.GoCoarserFinerGUI
Pmv.multiresCommands.MultiresGUI
Pmv.multiresCommands.commandList
Pmv.multiresCommands.goCoarserFinerGUI
Pmv.multiresCommands.goCoarserFinerGuiDescr1
Pmv.multiresCommands.goCoarserFinerGuiDescr2
Pmv.multiresCommands.multiresGuiDescr
Pmv.mvCommand.MVSetSelectionLevelGUI
Pmv.pdb2pqrCommands.SetupPdb2PqrCommandGUI
Pmv.pdb2pqrCommands.commandList
Pmv.pmvPalettes.AtomElements
Pmv.pmvPalettes.DavidGoodsell
Pmv.pmvPalettes.DavidGoodsellSortedKeys
Pmv.pmvPalettes.Rainbow
Pmv.pmvPalettes.RainbowSortedKey
Pmv.pmvPalettes.RasmolAmino
Pmv.pmvPalettes.RasmolAminoSortedKeys
Pmv.pmvPalettes.SecondaryStructureSides
Pmv.pmvPalettes.SecondaryStructureType
Pmv.pmvPalettes.Shapely
Pmv.povrayCommands.PovrayGUI
Pmv.povrayCommands.commandList
Pmv.povrayCommands.povrayGuiDescr
Pmv.qkollRes.resDict
Pmv.qkollua.q
Pmv.repairCommands.AddOXTGUICommandGUI
Pmv.repairCommands.CheckForCloseContactsGUICommandGUI
Pmv.repairCommands.CheckForMissingAtomsGUICommandGUI
Pmv.repairCommands.EditHistHydrogensGUICommandGUI
Pmv.repairCommands.ModifyTerminiCommandGUI
Pmv.repairCommands.RepairMissingAtomsGUICommandGUI
Pmv.repairCommands.checkForCloseContactsGUICommandGuiDescr
Pmv.repairCommands.checkForMissingAtomsGUICommandGuiDescr
Pmv.repairCommands.commandList
Pmv.repairCommands.repairMissingAtomsGUICommandGuiDescr
Pmv.sdCommands.ApplyTransformationsGUI
Pmv.sdCommands.ColorMolIndexedPolygonsGUI
Pmv.sdCommands.DisplayMolIndexedPolygonsGUI
Pmv.sdCommands.ReadBlurGUI
Pmv.sdCommands.ReadDockdataGUI
Pmv.sdCommands.ReadHarmonyGUI
Pmv.sdCommands.ReadTransformationsGUI
Pmv.sdCommands.SelectVertexGUI
Pmv.sdCommands.Transform
Pmv.sdCommands.commandList
Pmv.secondaryStructureCommands.ColorBySSElementTypeGUI
Pmv.secondaryStructureCommands.DisplaySSGUI
Pmv.secondaryStructureCommands.ExtrudeSSGUI
Pmv.secondaryStructureCommands.RibbonGUI
Pmv.secondaryStructureCommands.colorBySecondaryStructureTypeGuiDescr
Pmv.secondaryStructureCommands.commandList
Pmv.secondaryStructureCommands.computeSSGUI
Pmv.secondaryStructureCommands.computeSSGuiDescr
Pmv.secondaryStructureCommands.displaySSGuiDescr
Pmv.secondaryStructureCommands.extrudeSSGuiDescr
Pmv.secondaryStructureCommands.ribbonGuiDescr
Pmv.selectionCommands.MVClearSelectionGUI
Pmv.selectionCommands.MVDirectSelectCommandGUI
Pmv.selectionCommands.MVInvertSelectionGUI
Pmv.selectionCommands.MVSaveSetCommandGUI
Pmv.selectionCommands.MVSelectFromStringCommandGUI
Pmv.selectionCommands.MVSelectSetCommandGUI
Pmv.selectionCommands.MVSelectSphericalRegionGUI
Pmv.selectionCommands.commandList
Pmv.selectionCommands.mvDirectSelectCommandGuiDescr
Pmv.selectionCommands.mvInvertSelectionGuiDescr
Pmv.selectionCommands.mvSaveSetCommandGuiDescr
Pmv.selectionCommands.mvSelectFromStringCommandGuiDescr
Pmv.selectionCommands.mvSelectSetCommandGuiDescr
Pmv.selectionCommands.mvSelectSphericalRegionGuiDescr
Pmv.selectionCommands.sets__
Pmv.setangleCommands.SetTorsionGUI
Pmv.setangleCommands.commandList
Pmv.setangleCommands.setTorsionGuiDescr
Pmv.splineCommands.ComputeExtrudeSplineGUI
Pmv.splineCommands.ComputeSplineGUICommandGUI
Pmv.splineCommands.CustomSplineGUI
Pmv.splineCommands.DisplayExtrudedSplineCommandGUI
Pmv.splineCommands.DisplaySplineAsLineCommandGUI
Pmv.splineCommands.ExtrudeSplineCommandGUI
Pmv.splineCommands.commandList
Pmv.splineCommands.computeExtrudeSplineGuiDescr
Pmv.splineCommands.computeSplineCommandGuiDescr
Pmv.splineCommands.customSplineGuiDescr
Pmv.stringSelectorGUI.root
Pmv.stringSelectorGUI.strSel
Pmv.stringSelectorGUI.top
Pmv.superImposeCommands.SuperImposeAtomsGUICommandGUI
Pmv.superImposeCommands.commandList
Pmv.superimposeCommandsNew.SuperimposeAtomsCommandGUI
Pmv.superimposeCommandsNew.commandList
Pmv.traceCommands.ComputeExtrudeTraceGUI
Pmv.traceCommands.ComputeTraceGUI
Pmv.traceCommands.CustomTraceGUI
Pmv.traceCommands.DisplayTraceGUI
Pmv.traceCommands.ExtrudeTraceGUI
Pmv.traceCommands.commandList
Pmv.traceCommands.computeExtrudeTraceGuiDescr
Pmv.traceCommands.computeTraceGuiDescr
Pmv.traceCommands.customTraceGuiDescr
Pmv.traceCommands.displayTraceGuiDescr
Pmv.traceCommands.extrudeTraceGuiDescr
Pmv.trajectoryCommands.OpenTrajectoryGUI
Pmv.trajectoryCommands.PlayTrajectoryGUI
Pmv.trajectoryCommands.commandList
Pmv.updateCommands.UpdateGUI
Pmv.updateCommands.commandList
Pmv.vectfieldCommands.commandList
Pmv.vectfieldCommands.loadVUFileGUI
Pmv.vectfieldCommands.loadVectGUI
Pmv.videoCommands.VideoCommandGUI
Pmv.videoCommands.isrecordable
Pmv.visionCommands.ExportSetsGUI
Pmv.visionCommands.VisionCommandGUI
Pmv.visionCommands.commandList
Pmv.visionCommands.msg
Pmv.writeMsmsAsCommands.WriteColoredMGUI
Pmv.writeMsmsAsCommands.WriteSTLGUI
Pmv.writeMsmsAsCommands.commandList
Pmv.writeMsmsAsCommands.writeColoredMGuiDescr
Pmv.writeMsmsAsCommands.writeSTLGuiDescr
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