Everything

All Classes

PyAutoDock.AutoDockScorer.AutoDock305Scorer
PyAutoDock.AutoDockScorer.AutoDock41Scorer
PyAutoDock.AutoDockScorer.AutoDock4Scorer
PyAutoDock.AutoDockScorer.AutoDock4Scorer2
PyAutoDock.AutoDockScorer.AutoDock4ScorerLigOnly
PyAutoDock.AutoDockScorer.AutoDockTermWeights305
PyAutoDock.AutoDockScorer.AutoDockTermWeights4
PyAutoDock.AutoDockScorer.AutoDockTermWeights41
PyAutoDock.AutoDockScorer.AutoDockTermWeights4_1
PyAutoDock.AutoDockScorer.AutoDockTermWeights4_2
PyAutoDock.AutoDockScorer.AutoGrid305Scorer
PyAutoDock.AutoDockScorer.AutoGrid4Scorer
PyAutoDock.AutoGrid.AutoGrid
PyAutoDock.AutoGrid.AutoGrid4
PyAutoDock.AutoGrid.GridMap
PyAutoDock.InternalEnergy.InternalEnergy
PyAutoDock.MolecularSystem.AbstractMolecularSystem
PyAutoDock.MolecularSystem.MolecularSystem
PyAutoDock.MolecularSystemAdapter.AtomSetAdapter
PyAutoDock.MolecularSystemAdapter.GridMapAdapter
PyAutoDock.MolecularSystemAdapter.MolecularSystemAdapter
PyAutoDock.MolecularSystemAdapter.ResidueSetAdapter
PyAutoDock.compute_utils.EnergyScorer
PyAutoDock.compute_utils.PyADCalcAD3Energies
PyAutoDock.compute_utils.PyADCalcAD4Energies
PyAutoDock.compute_utils.PyPairWiseEnergyScorer
PyAutoDock.compute_utils.TrilinterpEnergyScorer
PyAutoDock.desolvation.DesolvationRefImpl
PyAutoDock.desolvation.NewDesolvationAtomMapRefImpl
PyAutoDock.desolvation.NewDesolvationDesolvMapRefImpl
PyAutoDock.desolvation.NewDesolvationLigOnlyRefImpl
PyAutoDock.desolvation.NewDesolvationRefImpl
PyAutoDock.electrostatics.ElectrostaticsRefImpl
PyAutoDock.reporter.PerAtomTypeReporter
PyAutoDock.reporter.PerAtomTypeReporterTest
PyAutoDock.reporter.Reporter
PyAutoDock.reporter.ReporterChainTest
PyAutoDock.reporter.ReporterResidueTest
PyAutoDock.reporter.ReporterTest
PyAutoDock.reporter.Reporter_HSG1_ind_Test
PyAutoDock.scorer.DistDepPairwiseScorer
PyAutoDock.scorer.Distance
PyAutoDock.scorer.HBondVDWSmoothing
PyAutoDock.scorer.PairwiseScorer
PyAutoDock.scorer.ScoringStrategy
PyAutoDock.scorer.WeightedMultiTerm
PyAutoDock.shaperecognition.ShapeRecognitionRefImpl
PyAutoDock.trilinterp_scorer.TrilinterpScorer
PyAutoDock.trilinterp_scorer.TrilinterpScorer_AD3
PyAutoDock.vanDerWaals.HBondVDWSmoothing
PyAutoDock.vanDerWaals.HBondVectorCalculator
PyAutoDock.vanDerWaals.HydrogenBonding12_10
PyAutoDock.vanDerWaals.HydrogenBondingRefImpl
PyAutoDock.vanDerWaals.NewHBondVectorCalculator
PyAutoDock.vanDerWaals.NewHydrogenBonding12_10RefImpl
PyAutoDock.vanDerWaals.NewHydrogenBondingRefImpl
PyAutoDock.vanDerWaals.NewVanDerWaalsHybridWeights
PyAutoDock.vanDerWaals.NewVanDerWaalsRefImpl
PyAutoDock.vanDerWaals.VanDerWaalsRefImpl
exceptions.AssertionError

All Variables

PyAutoDock.CRITICAL_DEPENDENCIES
PyAutoDock.MolecularSystemAdapter.Adapters
PyAutoDock.NONCRITICAL_DEPENDENCIES
PyAutoDock.compute_utils.pep_aromList
PyAutoDock.reporter.test_cases
PyAutoDock.trilinterp_scorer.m
PyAutoDock.trilinterp_scorer.ms
PyAutoDock.trilinterp_scorer.tls