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Frequently Asked Questions

AutoDockTools (ADT)

AutoDockTools under Cygwin

How to run AutoDockTools from Cygwin?

Download and install MGLTools for Windows; double-click on AutoDockTools icon to make sure that everything is installed and working. Start Cygwin and run the following command:

/cygdrive/c/Python24/python.exe c:"\Program Files\MGLTools 1.4.5\MGLToolsPckgs\AutoDockTools\bin\runAdt.py"

This should start ADT as before and you can alias it in .bashrc.

This FAQ applies to: 1.4.5

by Sargis Dallakyan last modified 2007-07-09 17:20 Molecular Graphics Laboratory, TSRI

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