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Problem running APBS?

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This FAQ applies to: Any version.

Missing libraries - Linux.
  • Case 1- libreadline: you are getting the following error message while running APBS:
    apbs: error while loading shared libraries: libreadline.so.4: cannot open shared object file: No such file or directory
    To fix this problem run ln -s /lib/libreadline.so.5.1 /lib/libreadline.so.4 as root.
  • Case 2 - libg2c:
    apbs: error while loading shared libraries: libg2c.so.0: cannot open shared object file: No such file or directory
    Solution: install g77.

You can also download and build APBS from source - apbs.sourceforge.net. If you copy resulting executable to MGLToolsPckgs/binaries folder of your MGLTools installation, PMV will use that executable instead of the one shipped with MGLTools.

by Sargis Dallakyan last modified 2007-09-28 10:35 Molecular Graphics Laboratory, TSRI

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